Index

_

__init__() (streamlines.analysis.Analysis method) (streamlines.core.Core method) (streamlines.geodata.Geodata method) (streamlines.mapping.Mapping method) (streamlines.plot.Plot method) (streamlines.pocl.Initialize_cl method) (streamlines.preprocess.Preprocess method) (streamlines.save.Save method) (streamlines.streamlining.Streamlining method) (streamlines.trace.Trace method) (streamlines.useful.Data method) (streamlines.useful.Info method)

_augment() (streamlines.analysis.Analysis method) (streamlines.mapping.Mapping method) _force_display() (streamlines.plot.Plot method) _new_figure() (streamlines.plot.Plot method) _parse_cmd_line_args() (in module streamlines.slm) _record_fig() (streamlines.plot.Plot method) _str2bool() (in module streamlines.slm)

A

active_masks (streamlines.geodata.Geodata.self attribute) adaptive_enqueue_nd_range_kernel() (in module streamlines.pocl) add_active_mask() (streamlines.state.State method)

Analysis (class in streamlines.analysis) analysis (streamlines.mapping.Mapping attribute) aspect_array (streamlines.mapping.Mapping attribute) aspect_mask_array (streamlines.mapping.Mapping attribute)

B

basin_mask_array (streamlines.geodata.Geodata.self attribute) basins_array (streamlines.geodata.Geodata.self attribute)

Bivariate_distribution (class in streamlines.analysis) break_out_of_loop (in module streamlines.preprocess)

C

channelhead_array (streamlines.mapping.Mapping attribute) check_has_loop (in module streamlines.preprocess) check_sizes() (in module streamlines.useful) choose_platform_and_device() (in module streamlines.pocl) cl_state (streamlines.mapping.Mapping attribute) coarse_subsegment_array (streamlines.mapping.Mapping attribute) coarse_subsegments_list_array (streamlines.mapping.Mapping attribute) compute_fields() (streamlines.trace.Trace method) compute_gradient_velocity_field() (in module streamlines.preprocess) compute_joint_distribn() (streamlines.analysis.Analysis method) compute_joint_distribn_dsla_dslc() (streamlines.analysis.Analysis method) compute_joint_distribn_dsla_dslt() (streamlines.analysis.Analysis method) compute_joint_distribn_dsla_usla() (streamlines.analysis.Analysis method) compute_joint_distribn_dslt_dslc() (streamlines.analysis.Analysis method) compute_joint_distribn_usla_uslc() (streamlines.analysis.Analysis method) compute_joint_distribn_usla_uslt() (streamlines.analysis.Analysis method)

compute_joint_distribn_uslc_dslc() (streamlines.analysis.Analysis method) compute_joint_distribn_uslt_dslt() (streamlines.analysis.Analysis method) compute_marginal_distribn() (streamlines.analysis.Analysis method) compute_marginal_distribn_dsla() (streamlines.analysis.Analysis method) compute_marginal_distribn_dslc() (streamlines.analysis.Analysis method) compute_marginal_distribn_dslt() (streamlines.analysis.Analysis method) compute_marginal_distribn_usla() (streamlines.analysis.Analysis method) compute_marginal_distribn_uslc() (streamlines.analysis.Analysis method) compute_marginal_distribn_uslt() (streamlines.analysis.Analysis method) compute_stats() (in module streamlines.useful) compute_topo_gradient_field() (in module streamlines.preprocess) compute_trajectories() (streamlines.trace.Trace method) conditioned_gradient_vector_field() (streamlines.preprocess.Preprocess method) connect_channel_pixels() (in module streamlines.connect) Core (class in streamlines.core) count_downchannels() (in module streamlines.countlink) create_seeds() (in module streamlines.useful)

D

Data (class in streamlines.useful) dilate() (in module streamlines.useful) do() (streamlines.analysis.Analysis method) (streamlines.geodata.Geodata method) (streamlines.mapping.Mapping method) (streamlines.plot.Plot method) (streamlines.preprocess.Preprocess method) (streamlines.save.Save method) (streamlines.trace.Trace method)

dtm_array (streamlines.geodata.Geodata.self attribute) dtm_mask_array (streamlines.geodata.Geodata.self attribute) dtm_path (streamlines.geodata.Geodata.self attribute)

E

estimate_bivariate_pdf() (in module streamlines.kde)

estimate_channel_threshold() (streamlines.analysis.Analysis method) estimate_univariate_pdf() (in module streamlines.kde)

F

find_and_fix_loops (in module streamlines.preprocess) find_blockages() (streamlines.preprocess.Preprocess method)

fix_blockages (in module streamlines.preprocess) flag_downchannels() (in module streamlines.countlink)

G

generate_hillshade() (streamlines.plot.Plot static method) Geodata (class in streamlines.geodata) geodata (streamlines.mapping.Mapping attribute) (streamlines.trace.Trace.self attribute) get_bbox() (in module streamlines.useful) get_dict_of_jsonables() (streamlines.state.State method)

get_flow_vector (in module streamlines.preprocess) get_sizes_of_nparrays() (streamlines.state.State method) get_streamlines_dict() (streamlines.state.State method) get_streamlines_sizes() (streamlines.state.State method) gpu_compute() (in module streamlines.kde) (in module streamlines.pocl)

H

has_one_diagonal_outflow (in module streamlines.preprocess) hsl() (in module streamlines.lengths) hsl_array (streamlines.mapping.Mapping attribute) hsl_mean_array (streamlines.mapping.Mapping attribute) hsl_ns_ks (streamlines.mapping.Mapping attribute) hsl_ns_ks_nm (streamlines.mapping.Mapping attribute) hsl_ns_ks_nmfactor (streamlines.mapping.Mapping attribute)

hsl_ns_mannwhitney (streamlines.mapping.Mapping attribute) hsl_ns_max (streamlines.mapping.Mapping attribute) hsl_ns_min (streamlines.mapping.Mapping attribute) hsl_ns_ranksum (streamlines.mapping.Mapping attribute) hsl_ns_ttest (streamlines.mapping.Mapping attribute) hsl_ns_welch (streamlines.mapping.Mapping attribute) hsl_stats_df (streamlines.mapping.Mapping attribute)

I

import_parameters() (in module streamlines.parameters) Info (class in streamlines.useful)

Initialize_cl (class in streamlines.pocl) inventorize() (streamlines.core.Core method) inventorize_run_state() (streamlines.state.State method)

L

label_confluences() (in module streamlines.label)

link_hillslopes() (in module streamlines.hillslopes) list_active_masks() (streamlines.state.State method)

M

make_basins_mask() (streamlines.geodata.Geodata method) make_cl_dtype() (in module streamlines.pocl) make_coarse_subsegment_masks() (streamlines.mapping.Mapping method) make_dtm_mask() (streamlines.geodata.Geodata method) make_padded_roi() (streamlines.geodata.Geodata method) map_channel_heads() (in module streamlines.channelheads)

map_channels_segments() (streamlines.mapping.Mapping method) Mapping (class in streamlines.mapping) mapping_array (streamlines.mapping.Mapping attribute) mask_nan_uv() (streamlines.preprocess.Preprocess method) merge_active_masks() (streamlines.state.State method) merged_coarse_mask_array (streamlines.mapping.Mapping attribute) midslope_array (streamlines.mapping.Mapping attribute)

N

n_coarse_subsegments (streamlines.mapping.Mapping attribute) neatly() (in module streamlines.useful)

normalize_velocity_field() (in module streamlines.preprocess) npamem() (in module streamlines.useful)

P

pad_array() (in module streamlines.preprocess) pad_arrays() (in module streamlines.preprocess) parameters_dir (streamlines.streamlining.Streamlining attribute) parameters_file (streamlines.streamlining.Streamlining attribute) pass1() (streamlines.mapping.Mapping method) pass2() (streamlines.mapping.Mapping method) pass3() (streamlines.mapping.Mapping method) path (streamlines.core.Core attribute) perform_RungeKutta2_integration (streamlines.trace.Trace.self attribute) pick_seeds() (in module streamlines.useful) pixel_size (streamlines.geodata.Geodata.self attribute) Plot (class in streamlines.plot) plot_aspect() (streamlines.plot.Plot method) plot_blockages_overlay() (streamlines.plot.Plot method) plot_channels() (streamlines.plot.Plot method) plot_classical_streamlines() (streamlines.plot.Plot method) plot_classical_streamlines_and_vectors() (streamlines.plot.Plot method) plot_classical_streamlines_overlay() (streamlines.plot.Plot method) plot_compound_markers() (streamlines.plot.Plot method) plot_contours_overlay() (streamlines.plot.Plot method) plot_distributions() (streamlines.plot.Plot method) plot_dtm_shaded_relief() (streamlines.plot.Plot method) plot_flow_maps() (streamlines.plot.Plot method) plot_gradient_vector_field() (streamlines.plot.Plot method) plot_gradient_vector_field_overlay() (streamlines.plot.Plot method) plot_gridded_data() (streamlines.plot.Plot method) plot_hsl() (streamlines.plot.Plot method) plot_hsl_aspect_distribution() (streamlines.plot.Plot method) plot_hsl_contoured() (streamlines.plot.Plot method) plot_hsl_distributions() (streamlines.plot.Plot method) plot_joint_pdf() (streamlines.plot.Plot method) plot_joint_pdf_dsla_dslc() (streamlines.plot.Plot method) plot_joint_pdf_dsla_dslt() (streamlines.plot.Plot method) plot_joint_pdf_dsla_usla() (streamlines.plot.Plot method)

plot_joint_pdf_dslt_dsla() (streamlines.plot.Plot method) plot_joint_pdf_dslt_dslc() (streamlines.plot.Plot method) plot_joint_pdf_usla_uslc() (streamlines.plot.Plot method) plot_joint_pdf_usla_uslt() (streamlines.plot.Plot method) plot_joint_pdf_uslc_dslc() (streamlines.plot.Plot method) plot_joint_pdf_uslt_dslt() (streamlines.plot.Plot method) plot_loops_overlay() (streamlines.plot.Plot method) plot_maps() (streamlines.plot.Plot method) plot_marginal_pdf() (streamlines.plot.Plot method) plot_marginal_pdf_dsla() (streamlines.plot.Plot method) plot_marginal_pdf_dslc() (streamlines.plot.Plot method) plot_marginal_pdf_dslt() (streamlines.plot.Plot method) plot_marginal_pdf_usla() (streamlines.plot.Plot method) plot_marginal_pdf_uslc() (streamlines.plot.Plot method) plot_marginal_pdf_uslt() (streamlines.plot.Plot method) plot_midslope_elevations_pdf() (streamlines.plot.Plot method) plot_roi_shaded_relief() (streamlines.plot.Plot method) plot_roi_shaded_relief_overlay() (streamlines.plot.Plot method) plot_seed_points_overlay() (streamlines.plot.Plot method) plot_segments() (streamlines.plot.Plot method) plot_simple_grid() (streamlines.plot.Plot method) plot_slope_angles_pdf() (streamlines.plot.Plot method) plot_streamlines() (streamlines.plot.Plot method) plot_updownstreamlines_overlay() (streamlines.plot.Plot method) pprint() (streamlines.core.Core method) prepare_buffers() (in module streamlines.pocl) prepare_cl() (in module streamlines.pocl) prepare_cl_context() (in module streamlines.pocl) prepare_cl_queue() (in module streamlines.pocl) prepare_memory() (in module streamlines.kde) Preprocess (class in streamlines.preprocess) preprocess (streamlines.mapping.Mapping attribute) (streamlines.trace.Trace.self attribute) print() (streamlines.core.Core method) prune_channel_heads() (in module streamlines.channelheads)

R

random_colormap() (in module streamlines.plot) raw_gradient_vector_field() (streamlines.preprocess.Preprocess method) read_basins_file() (streamlines.geodata.Geodata method) read_dtm_file() (streamlines.geodata.Geodata method) read_geotiff() (in module streamlines.useful) read_hdf5() (streamlines.state.State method) read_json_file() (in module streamlines.parameters) remove_active_mask() (streamlines.state.State method) report_build_log() (in module streamlines.pocl) report_device_info() (in module streamlines.pocl) report_kernel_info() (in module streamlines.pocl)

reset_active_masks() (streamlines.state.State method) ridge_array (streamlines.mapping.Mapping attribute) roi_array (streamlines.geodata.Geodata.self attribute) roi_nx (streamlines.geodata.Geodata.self attribute) roi_ny (streamlines.geodata.Geodata.self attribute) roi_padded_array (streamlines.geodata.Geodata.self attribute) roi_pixel_size (streamlines.geodata.Geodata.self attribute) roi_x_bounds (streamlines.geodata.Geodata.self attribute) roi_x_origin (streamlines.geodata.Geodata.self attribute) roi_y_bounds (streamlines.geodata.Geodata.self attribute) roi_y_origin (streamlines.geodata.Geodata.self attribute) run() (in module streamlines.slm)

S

Save (class in streamlines.save) save_analyses() (streamlines.save.Save method) save_figs() (streamlines.save.Save method) save_maps() (streamlines.save.Save method) save_state() (streamlines.state.State method) savez_dicts_of_nparrays() (streamlines.state.State method) seed_point_array (streamlines.trace.Trace attribute) (streamlines.trace.Trace.self attribute) segment_channels() (in module streamlines.segment) segment_hillslopes() (in module streamlines.segment) set_compile_options() (in module streamlines.pocl) set_flags() (streamlines.useful.Info method) set_savestate_filename() (streamlines.state.State method) set_speed_field() (in module streamlines.preprocess) set_thresholds() (streamlines.useful.Info method) set_velocity_field() (in module streamlines.preprocess) set_xy() (streamlines.useful.Info method) show() (streamlines.plot.Plot static method) sla_array (streamlines.trace.Trace attribute) slc_array (streamlines.trace.Trace attribute) slm (module) slt_array (streamlines.trace.Trace attribute) State (class in streamlines.state) state_filename (streamlines.state.State attribute) streamline_arrays_list (streamlines.trace.Trace attribute) streamlines.analysis (module)

streamlines.channelheads (module) streamlines.connect (module) streamlines.core (module) streamlines.countlink (module) streamlines.fields (module) streamlines.geodata (module) streamlines.hillslopes (module) streamlines.initialize (module) streamlines.kde (module) streamlines.label (module) streamlines.lengths (module) streamlines.mapping (module) streamlines.parameters (module) streamlines.plot (module) streamlines.pocl (module) streamlines.preprocess (module) streamlines.save (module) streamlines.segment (module) streamlines.slm (module) streamlines.state (module) streamlines.streamlining (module) streamlines.trace (module) streamlines.trajectories (module) streamlines.useful (module) Streamlining (class in streamlines.streamlining) subsegment_flanks() (in module streamlines.segment)

T

thinchannel_array (streamlines.mapping.Mapping attribute) Trace (class in streamlines.trace) trace (streamlines.mapping.Mapping attribute)

traj_length_array (streamlines.trace.Trace attribute) traj_nsteps_array (streamlines.trace.Trace attribute) traj_stats_df (streamlines.trace.Trace attribute) true_size() (in module streamlines.useful)

U

Univariate_distribution (class in streamlines.analysis)

unnormalize_velocity_field() (in module streamlines.preprocess) upstream_of_diagonal_outflow (in module streamlines.preprocess)

V

vbackup (streamlines.mapping.Mapping attribute) verbose (streamlines.mapping.Mapping attribute)

vprint() (in module streamlines.useful) vprogress (streamlines.mapping.Mapping attribute)

W

write_geotiff() (in module streamlines.useful)

write_hdf5() (streamlines.state.State method)

X

x_roi_n_pixel_centers (streamlines.geodata.Geodata.self attribute)

Y

y_roi_n_pixel_centers (streamlines.geodata.Geodata.self attribute)